BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023B09SP1|AL428010
(993 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1148 1959 0.0
>3x_Contig1148
Length = 4745
Score = 1959 bits (987), Expect = 0.0
Identities = 988/989 (99%)
Strand = Plus / Minus
Query: 1 gtgtattatattatattcatctcagttgggaaactgagatgaataatgagagtmaacact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4273 gtgtattatattatattcatctcagttgggaaactgagatgaataatgagagtaaacact 4214
Query: 61 ttgaattccttgctcccgagatgattcactgttgaaagattcaaccatagtctcccagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4213 ttgaattccttgctcccgagatgattcactgttgaaagattcaaccatagtctcccagta 4154
Query: 121 caatttactaactgctttgagtattcactgttccactttgttatttttcaataatgagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4153 caatttactaactgctttgagtattcactgttccactttgttatttttcaataatgagcc 4094
Query: 181 aggggtttgtcctttgggttaagaccccaggatcattgagaaataatgatttgaaacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4093 aggggtttgtcctttgggttaagaccccaggatcattgagaaataatgatttgaaacttt 4034
Query: 241 atgatttccaccccgaattaatgtttagaaaagcagccaaggttcttgcatccttcgtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4033 atgatttccaccccgaattaatgtttagaaaagcagccaaggttcttgcatccttcgtta 3974
Query: 301 aacccaatcaggttctttcggcaaacgatgttattcctccagaagttttgaaaagtgcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3973 aacccaatcaggttctttcggcaaacgatgttattcctccagaagttttgaaaagtgcaa 3914
Query: 361 agggtctagcaattatcaccgttttgaaagctgggttccttttcagtggtagagcaggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3913 agggtctagcaattatcaccgttttgaaagctgggttccttttcagtggtagagcaggat 3854
Query: 421 ccggtgttatcgtggctagattgcctgatggtggctggtctgctccttctgccatcgcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3853 ccggtgttatcgtggctagattgcctgatggtggctggtctgctccttctgccatcgcaa 3794
Query: 481 tggctggtgctggtgctggtggtatggtagggcttgaattgaccgattttgttttcatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3793 tggctggtgctggtgctggtggtatggtagggcttgaattgaccgattttgttttcatct 3734
Query: 541 tgaacactgcggatgcagttaaatctttttcacagttcggttctatcactttgggtggta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3733 tgaacactgcggatgcagttaaatctttttcacagttcggttctatcactttgggtggta 3674
Query: 601 acgtctctgttgcggctggtccattgggtagaaacgcagaagctgcagcttctgcatcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3673 acgtctctgttgcggctggtccattgggtagaaacgcagaagctgcagcttctgcatcca 3614
Query: 661 ctagcggtgttgctgccatcttcgcttattctaagactaaaggtttatttgccggtgtct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3613 ctagcggtgttgctgccatcttcgcttattctaagactaaaggtttatttgccggtgtct 3554
Query: 721 cgttagaaggttcggtgatcattgaaagaagagaggcaaacagaaagttctacggtaaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3553 cgttagaaggttcggtgatcattgaaagaagagaggcaaacagaaagttctacggtaaca 3494
Query: 781 attgtaccgcaaagatgattctatctggccgtgtcagacctcctccatcggtagaccctc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3493 attgtaccgcaaagatgattctatctggccgtgtcagacctcctccatcggtagaccctc 3434
Query: 841 tattccgtgttctagagtcccgtgccttcaactatagatctccaagaggtgacaactacg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3433 tattccgtgttctagagtcccgtgccttcaactatagatctccaagaggtgacaactacg 3374
Query: 901 atgatgatgacgactacgacgaagacgaagacggagagtactataacgatatcccatcta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3373 atgatgatgacgactacgacgaagacgaagacggagagtactataacgatatcccatcta 3314
Query: 961 gcttcgattcagatgatttggattctcaa 989
|||||||||||||||||||||||||||||
Sbjct: 3313 gcttcgattcagatgatttggattctcaa 3285
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7854
Number of Sequences: 1807
Number of extensions: 7854
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 1
length of query: 993
length of database: 10,358,551
effective HSP length: 16
effective length of query: 977
effective length of database: 10,329,639
effective search space: 10092057303
effective search space used: 10092057303
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)